Package: scDHA 1.2.3

Ha Nguyen

scDHA: Single-Cell Decomposition using Hierarchical Autoencoder

Provides a fast and accurate pipeline for single-cell analyses. The 'scDHA' software package can perform clustering, dimension reduction and visualization, classification, and time-trajectory inference on single-cell data (Tran et.al. (2021) <doi:10.1038/s41467-021-21312-2>).

Authors:Ha Nguyen [cre], Duc Tran [aut], Tin Nguyen [fnd], Hao Chen [ctb]

scDHA_1.2.3.tar.gz
scDHA_1.2.3.zip(r-4.7-x86_64)scDHA_1.2.3.zip(r-4.7-arm64)scDHA_1.2.3.zip(r-4.6-x86_64)scDHA_1.2.3.zip(r-4.6-arm64)scDHA_1.2.3.zip(r-4.5-x86_64)
scDHA_1.2.3.tgz(r-4.6-x86_64)scDHA_1.2.3.tgz(r-4.6-arm64)scDHA_1.2.3.tgz(r-4.5-x86_64)scDHA_1.2.3.tgz(r-4.5-arm64)
scDHA_1.2.3.tar.gz(r-4.7-arm64)scDHA_1.2.3.tar.gz(r-4.7-x86_64)scDHA_1.2.3.tar.gz(r-4.6-arm64)scDHA_1.2.3.tar.gz(r-4.6-x86_64)
scDHA_1.2.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
scDHA/json (API)

# Install 'scDHA' in R:

install.packages('scDHA', repos = c('https://duct317.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/duct317/scdha/issues

Uses libs:

c++– GNU Standard C++ Library v3

Datasets:

Goolam - Goolam
Goolam_result - Goolam_result

On CRAN:

cpp

6.00 score 42 stars 24 scripts 370 downloads 4 exports 49 dependencies

Last updated from:ac9060b707. Checks:15 OK. Indexed: yes.

Target	Result	Time
linux-devel-arm64	OK	196
linux-devel-x86_64	OK	236
source / vignettes	OK	253
linux-release-arm64	OK	192
linux-release-x86_64	OK	220
macos-release-arm64	OK	164
macos-release-x86_64	OK	433
macos-oldrel-arm64	OK	223
macos-oldrel-x86_64	OK	645
windows-devel-arm64	OK	410
windows-devel-x86_64	OK	198
windows-release-arm64	OK	401
windows-release-x86_64	OK	187
windows-oldrel-x86_64	OK	176
wasm-release	OK	124